Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 FKBP4P8-201ENST00000610931 1369 ntBASIC14.74□□□□□ -0.05
RNF135Q8IUD6 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 KRT8P30-201ENST00000432100 650 ntBASIC14.74□□□□□ -0.05
RNF135Q8IUD6 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 KRT18P37-201ENST00000520711 1282 ntBASIC14.74□□□□□ -0.05
RNF135Q8IUD6 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 AL353622.2-201ENST00000605846 425 ntBASIC14.74□□□□□ -0.05
RNF135Q8IUD6 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.74□□□□□ -0.05
RNF135Q8IUD6 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RNF135Q8IUD6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 GEMIN8P4-201ENST00000380526 729 ntBASIC14.73□□□□□ -0.05
RNF135Q8IUD6 OR7E115P-201ENST00000382617 1024 ntBASIC14.73□□□□□ -0.05
RNF135Q8IUD6 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 GRPEL2P1-201ENST00000453145 339 ntBASIC14.73□□□□□ -0.05
RNF135Q8IUD6 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 NDUFB10P1-201ENST00000567319 521 ntBASIC14.73□□□□□ -0.05
RNF135Q8IUD6 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.73□□□□□ -0.05
RNF135Q8IUD6 AL359091.4-201ENST00000610052 409 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms