Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 FGD5P1-202ENST00000614866 2498 ntBASIC16.22■□□□□ 0.19
IRX3P78415 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
IRX3P78415 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IRX3P78415 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.21■□□□□ 0.19
IRX3P78415 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IRX3P78415 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
IRX3P78415 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IRX3P78415 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.21■□□□□ 0.19
IRX3P78415 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
IRX3P78415 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
IRX3P78415 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
IRX3P78415 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IRX3P78415 AC073210.1-201ENST00000414799 232 ntBASIC16.21■□□□□ 0.19
IRX3P78415 HLA-DPA2-205ENST00000433582 733 ntBASIC16.21■□□□□ 0.19
IRX3P78415 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.21■□□□□ 0.19
IRX3P78415 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.21■□□□□ 0.19
IRX3P78415 TPT1P11-201ENST00000458482 498 ntBASIC16.21■□□□□ 0.19
IRX3P78415 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.21■□□□□ 0.19
IRX3P78415 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.21■□□□□ 0.19
IRX3P78415 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.21■□□□□ 0.19
IRX3P78415 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.21■□□□□ 0.19
IRX3P78415 ABHD17AP9-201ENST00000561925 548 ntBASIC16.21■□□□□ 0.19
IRX3P78415 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.21■□□□□ 0.19
IRX3P78415 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.21■□□□□ 0.19
IRX3P78415 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.21■□□□□ 0.19
IRX3P78415 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.21■□□□□ 0.19
IRX3P78415 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.21■□□□□ 0.19
IRX3P78415 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
IRX3P78415 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IRX3P78415 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IRX3P78415 BX324167.2-201ENST00000623717 3316 ntBASIC16.21■□□□□ 0.19
IRX3P78415 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
IRX3P78415 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IRX3P78415 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
IRX3P78415 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.21■□□□□ 0.18
IRX3P78415 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
IRX3P78415 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.21■□□□□ 0.18
IRX3P78415 AC106818.1-201ENST00000623223 3242 ntBASIC16.21■□□□□ 0.18
IRX3P78415 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
IRX3P78415 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.21■□□□□ 0.18
IRX3P78415 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.2■□□□□ 0.18
IRX3P78415 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 AC117503.4-201ENST00000623229 1418 ntBASIC16.2■□□□□ 0.18
IRX3P78415 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
IRX3P78415 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
IRX3P78415 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.2■□□□□ 0.18
IRX3P78415 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
IRX3P78415 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.2■□□□□ 0.18
IRX3P78415 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.2■□□□□ 0.18
IRX3P78415 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 INTS4P1-203ENST00000641008 3683 ntBASIC16.2■□□□□ 0.18
IRX3P78415 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
IRX3P78415 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
IRX3P78415 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.2■□□□□ 0.18
IRX3P78415 AP000244.1-201ENST00000424582 201 ntBASIC16.2■□□□□ 0.18
IRX3P78415 PSAT1P2-201ENST00000426107 972 ntBASIC16.2■□□□□ 0.18
IRX3P78415 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.2■□□□□ 0.18
IRX3P78415 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.2■□□□□ 0.18
IRX3P78415 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 AC106047.2-201ENST00000511723 743 ntBASIC16.2■□□□□ 0.18
IRX3P78415 COQ10BP2-201ENST00000513804 724 ntBASIC16.2■□□□□ 0.18
IRX3P78415 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 AC068831.5-201ENST00000557387 328 ntBASIC16.2■□□□□ 0.18
IRX3P78415 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.2■□□□□ 0.18
IRX3P78415 AC005777.1-201ENST00000588332 187 ntBASIC16.2■□□□□ 0.18
IRX3P78415 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.2■□□□□ 0.18
IRX3P78415 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 AL139158.3-201ENST00000641212 1562 ntBASIC16.2■□□□□ 0.18
IRX3P78415 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
IRX3P78415 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.2■□□□□ 0.18
IRX3P78415 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
IRX3P78415 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
IRX3P78415 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IRX3P78415 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
IRX3P78415 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IRX3P78415 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms