Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC106827.1-201ENST00000366454 431 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 CALR4P-201ENST00000431943 946 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 AC095040.1-201ENST00000513286 675 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 AC242376.1-201ENST00000559033 726 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 AC145285.5-201ENST00000562217 361 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 MIR4265-201ENST00000582152 99 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 AC020922.3-201ENST00000595064 547 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 FAM90A2P-201ENST00000511144 1395 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 FAM90A25P-201ENST00000528404 1395 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.12□□□□□ -0.47
HIST1H3AP68431 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H3AP68431 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H3AP68431 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 AC008040.5-201ENST00000599781 1781 ntBASIC12.11□□□□□ -0.47
HIST1H3AP68431 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 AL627231.1-201ENST00000394467 1125 ntBASIC12.11□□□□□ -0.47
HIST1H3AP68431 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 GGTLC4P-201ENST00000402176 664 ntBASIC12.11□□□□□ -0.47
HIST1H3AP68431 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.11□□□□□ -0.47
HIST1H3AP68431 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 AC099548.2-209ENST00000480264 625 ntBASIC12.11□□□□□ -0.47
HIST1H3AP68431 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 MIR3619-201ENST00000579667 83 ntBASIC12.11□□□□□ -0.47
HIST1H3AP68431 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 SIGLEC18P-201ENST00000602271 909 ntBASIC12.11□□□□□ -0.47
HIST1H3AP68431 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H3AP68431 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H3AP68431 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms