Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RN7SL375P-201ENST00000492442 298 ntBASIC12.77□□□□□ -0.37
RFC3P40938 GOLGA2P8-201ENST00000505201 779 ntBASIC12.77□□□□□ -0.37
RFC3P40938 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.77□□□□□ -0.37
RFC3P40938 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.77□□□□□ -0.37
RFC3P40938 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.77□□□□□ -0.37
RFC3P40938 MIR4265-201ENST00000582152 99 ntBASIC12.77□□□□□ -0.37
RFC3P40938 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.77□□□□□ -0.37
RFC3P40938 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.77□□□□□ -0.37
RFC3P40938 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.77□□□□□ -0.37
RFC3P40938 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.77□□□□□ -0.37
RFC3P40938 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.77□□□□□ -0.37
RFC3P40938 AL031673.1-201ENST00000611460 466 ntBASIC12.77□□□□□ -0.37
RFC3P40938 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RFC3P40938 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.77□□□□□ -0.37
RFC3P40938 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.77□□□□□ -0.37
RFC3P40938 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.77□□□□□ -0.37
RFC3P40938 RPL13AP3-202ENST00000494676 1473 ntBASIC12.77□□□□□ -0.37
RFC3P40938 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.77□□□□□ -0.37
RFC3P40938 MST1P2-201ENST00000457982 2291 ntBASIC12.77□□□□□ -0.37
RFC3P40938 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.77□□□□□ -0.37
RFC3P40938 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
RFC3P40938 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 ODCP-201ENST00000459650 1639 ntBASIC12.77□□□□□ -0.37
RFC3P40938 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFC3P40938 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RFC3P40938 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.76□□□□□ -0.37
RFC3P40938 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
RFC3P40938 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 AC019109.1-201ENST00000401725 1874 ntBASIC12.76□□□□□ -0.37
RFC3P40938 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.76□□□□□ -0.37
RFC3P40938 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RFC3P40938 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.76□□□□□ -0.37
RFC3P40938 AL355334.1-201ENST00000417713 215 ntBASIC12.76□□□□□ -0.37
RFC3P40938 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.76□□□□□ -0.37
RFC3P40938 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.76□□□□□ -0.37
RFC3P40938 AC084752.1-201ENST00000509766 622 ntBASIC12.76□□□□□ -0.37
RFC3P40938 RN7SKP155-201ENST00000516031 288 ntBASIC12.76□□□□□ -0.37
RFC3P40938 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.76□□□□□ -0.37
RFC3P40938 MIR5196-201ENST00000578146 115 ntBASIC12.76□□□□□ -0.37
RFC3P40938 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.76□□□□□ -0.37
RFC3P40938 AP005264.5-201ENST00000590066 467 ntBASIC12.76□□□□□ -0.37
RFC3P40938 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.76□□□□□ -0.37
RFC3P40938 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.76□□□□□ -0.37
RFC3P40938 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.76□□□□□ -0.37
RFC3P40938 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
RFC3P40938 HLA-C-210ENST00000640219 976 ntBASIC12.76□□□□□ -0.37
RFC3P40938 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
RFC3P40938 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 PDXDC2P-206ENST00000534700 1315 ntBASIC12.76□□□□□ -0.37
RFC3P40938 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.76□□□□□ -0.37
RFC3P40938 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.76□□□□□ -0.37
RFC3P40938 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.76□□□□□ -0.37
RFC3P40938 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 AC083964.2-201ENST00000623988 2396 ntBASIC12.76□□□□□ -0.37
RFC3P40938 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RFC3P40938 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFC3P40938 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFC3P40938 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RFC3P40938 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms