Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHRNA3P32297 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHRNA3P32297 ZNF493-208ENST00000599461 1769 ntBASIC14.67□□□□□ -0.06
CHRNA3P32297 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.67□□□□□ -0.06
CHRNA3P32297 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNA3P32297 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNA3P32297 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNA3P32297 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNA3P32297 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHRNA3P32297 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNA3P32297 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNA3P32297 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 AC008620.2-201ENST00000510294 1569 ntBASIC14.66□□□□□ -0.06
CHRNA3P32297 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 RPL13AP3-202ENST00000494676 1473 ntBASIC14.66□□□□□ -0.06
CHRNA3P32297 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 OR2R1P-201ENST00000441404 914 ntBASIC14.66□□□□□ -0.06
CHRNA3P32297 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRNA3P32297 AL353637.1-201ENST00000451571 732 ntBASIC14.66□□□□□ -0.06
CHRNA3P32297 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.66□□□□□ -0.06
CHRNA3P32297 POU5F1P2-201ENST00000521750 823 ntBASIC14.66□□□□□ -0.06
CHRNA3P32297 AC105129.2-201ENST00000559536 390 ntBASIC14.66□□□□□ -0.06
CHRNA3P32297 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRNA3P32297 FGFR3P5-201ENST00000564496 886 ntBASIC14.66□□□□□ -0.06
CHRNA3P32297 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRNA3P32297 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRNA3P32297 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.66□□□□□ -0.06
CHRNA3P32297 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNA3P32297 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNA3P32297 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHRNA3P32297 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNA3P32297 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHRNA3P32297 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHRNA3P32297 AGGF1P10-201ENST00000635005 2191 ntBASIC14.66□□□□□ -0.06
CHRNA3P32297 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNA3P32297 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 AL139158.3-201ENST00000641212 1562 ntBASIC14.65□□□□□ -0.06
CHRNA3P32297 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CHRNA3P32297 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 PDIA3P2-201ENST00000428073 158 ntBASIC14.65□□□□□ -0.06
CHRNA3P32297 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 AC073150.1-201ENST00000450406 1084 ntBASIC14.65□□□□□ -0.06
CHRNA3P32297 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHRNA3P32297 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.65□□□□□ -0.06
CHRNA3P32297 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CHRNA3P32297 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.65□□□□□ -0.06
CHRNA3P32297 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 MIR3188-201ENST00000583494 85 ntBASIC14.65□□□□□ -0.06
CHRNA3P32297 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.65□□□□□ -0.06
CHRNA3P32297 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms