Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRMP28827 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PTPRMP28827 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 AC245297.1-201ENST00000313342 933 ntBASIC19.42■□□□□ 0.7
PTPRMP28827 TSEN15P3-201ENST00000422363 367 ntBASIC19.42■□□□□ 0.7
PTPRMP28827 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPRMP28827 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRMP28827 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRMP28827 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPRMP28827 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC19.42■□□□□ 0.7
PTPRMP28827 AP005121.2-201ENST00000583306 1101 ntBASIC19.42■□□□□ 0.7
PTPRMP28827 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC19.42■□□□□ 0.7
PTPRMP28827 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPRMP28827 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PTPRMP28827 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PTPRMP28827 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRMP28827 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PTPRMP28827 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRMP28827 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PTPRMP28827 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRMP28827 COQ4-202ENST00000372875 928 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRMP28827 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 RN7SL756P-201ENST00000488739 268 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRMP28827 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRMP28827 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
PTPRMP28827 MIR1914-201ENST00000607800 80 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
PTPRMP28827 CHIAP2-204ENST00000532686 1449 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PTPRMP28827 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRMP28827 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRMP28827 OR2T32P-201ENST00000403423 963 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 DDTP1-201ENST00000443589 383 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 PFN1P3-201ENST00000443612 402 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 PFN1P4-201ENST00000450970 402 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 RN7SL559P-201ENST00000476501 297 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRMP28827 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPRMP28827 AP001120.3-201ENST00000585729 489 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 AFMID-205ENST00000586731 550 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPRMP28827 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 AL357137.1-201ENST00000604645 203 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC19.41■□□□□ 0.7
PTPRMP28827 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRMP28827 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRMP28827 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPRMP28827 AC073488.1-201ENST00000416620 1600 ntBASIC19.4■□□□□ 0.7
PTPRMP28827 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPRMP28827 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRMP28827 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms