Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HLA-DOBP13765 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HLA-DOBP13765 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HLA-DOBP13765 AC125807.2-201ENST00000513358 3514 ntBASIC12.46□□□□□ -0.42
HLA-DOBP13765 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HLA-DOBP13765 ZNF493-208ENST00000599461 1769 ntBASIC12.46□□□□□ -0.42
HLA-DOBP13765 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 STRCP1-201ENST00000509801 5328 ntBASIC12.45□□□□□ -0.42
HLA-DOBP13765 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 AC007718.1-201ENST00000621078 280 ntBASIC12.45□□□□□ -0.42
HLA-DOBP13765 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HLA-DOBP13765 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 AC138761.6-201ENST00000583997 1423 ntBASIC12.45□□□□□ -0.42
HLA-DOBP13765 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DOBP13765 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 CAP2P1-201ENST00000557743 1390 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 NRADDP-202ENST00000641269 1585 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 AL583805.1-201ENST00000391389 531 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 PPP1R2P4-201ENST00000424051 595 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 AC005722.1-201ENST00000431878 964 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DOBP13765 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.44□□□□□ -0.42
HLA-DOBP13765 DUTP3-201ENST00000450025 415 ntBASIC12.44□□□□□ -0.42
HLA-DOBP13765 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms