Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
BCKDHAP12694 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.26□□□□□ -0.29
BCKDHAP12694 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BCKDHAP12694 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
BCKDHAP12694 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.26□□□□□ -0.29
BCKDHAP12694 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BCKDHAP12694 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.26□□□□□ -0.29
BCKDHAP12694 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.26□□□□□ -0.29
BCKDHAP12694 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
BCKDHAP12694 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
BCKDHAP12694 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.26□□□□□ -0.29
BCKDHAP12694 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.26□□□□□ -0.29
BCKDHAP12694 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.26□□□□□ -0.29
BCKDHAP12694 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.26□□□□□ -0.29
BCKDHAP12694 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.26□□□□□ -0.29
BCKDHAP12694 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
BCKDHAP12694 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BCKDHAP12694 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.26□□□□□ -0.29
BCKDHAP12694 MIR3940-201ENST00000579148 102 ntBASIC13.26□□□□□ -0.29
BCKDHAP12694 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.26□□□□□ -0.29
BCKDHAP12694 AL008638.5-201ENST00000623814 1298 ntBASIC13.26□□□□□ -0.29
BCKDHAP12694 AC040160.2-201ENST00000623816 1675 ntBASIC13.26□□□□□ -0.29
BCKDHAP12694 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.26□□□□□ -0.29
BCKDHAP12694 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BCKDHAP12694 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BCKDHAP12694 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
BCKDHAP12694 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
BCKDHAP12694 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BCKDHAP12694 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
BCKDHAP12694 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 AC015909.3-201ENST00000572855 1794 ntBASIC13.25□□□□□ -0.29
BCKDHAP12694 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
BCKDHAP12694 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
BCKDHAP12694 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.25□□□□□ -0.29
BCKDHAP12694 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.25□□□□□ -0.29
BCKDHAP12694 AC005722.1-201ENST00000431878 964 ntBASIC13.25□□□□□ -0.29
BCKDHAP12694 AC104306.2-201ENST00000451877 341 ntBASIC13.25□□□□□ -0.29
BCKDHAP12694 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.25□□□□□ -0.29
BCKDHAP12694 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.25□□□□□ -0.29
BCKDHAP12694 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.25□□□□□ -0.29
BCKDHAP12694 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.25□□□□□ -0.29
BCKDHAP12694 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.25□□□□□ -0.29
BCKDHAP12694 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.25□□□□□ -0.29
BCKDHAP12694 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
BCKDHAP12694 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.25□□□□□ -0.29
BCKDHAP12694 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 AC012531.1-201ENST00000562848 2680 ntBASIC13.25□□□□□ -0.29
BCKDHAP12694 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BCKDHAP12694 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
BCKDHAP12694 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.25□□□□□ -0.29
BCKDHAP12694 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BCKDHAP12694 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.24□□□□□ -0.29
BCKDHAP12694 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.24□□□□□ -0.29
BCKDHAP12694 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BCKDHAP12694 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BCKDHAP12694 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
BCKDHAP12694 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
BCKDHAP12694 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.24□□□□□ -0.29
BCKDHAP12694 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms