Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TREHP1-201ENST00000531328 465 ntBASIC10.88□□□□□ -0.67
CD28P10747 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC10.88□□□□□ -0.67
CD28P10747 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 BATF-202ENST00000555504 361 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 AC015802.1-201ENST00000588104 1449 ntBASIC10.88□□□□□ -0.67
CD28P10747 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.88□□□□□ -0.67
CD28P10747 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 OR2I1P-208ENST00000641137 4948 ntBASIC10.88□□□□□ -0.67
CD28P10747 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.88□□□□□ -0.67
CD28P10747 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CD28P10747 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
CD28P10747 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 AC041040.2-201ENST00000622926 2899 ntBASIC10.87□□□□□ -0.67
CD28P10747 TUBB8P4-201ENST00000511806 1324 ntBASIC10.87□□□□□ -0.67
CD28P10747 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC10.87□□□□□ -0.67
CD28P10747 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CD28P10747 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC10.87□□□□□ -0.67
CD28P10747 AQP7P5-201ENST00000428759 1049 ntBASIC10.87□□□□□ -0.67
CD28P10747 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 AQP7P4-201ENST00000447083 1042 ntBASIC10.87□□□□□ -0.67
CD28P10747 AQP7P2-201ENST00000453967 1041 ntBASIC10.87□□□□□ -0.67
CD28P10747 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC10.87□□□□□ -0.67
CD28P10747 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC10.87□□□□□ -0.67
CD28P10747 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC10.87□□□□□ -0.67
CD28P10747 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC10.87□□□□□ -0.67
CD28P10747 AP005264.6-204ENST00000588436 719 ntBASIC10.87□□□□□ -0.67
CD28P10747 AC005357.2-202ENST00000590507 1060 ntBASIC10.87□□□□□ -0.67
CD28P10747 AQP7P3-201ENST00000624547 1041 ntBASIC10.87□□□□□ -0.67
CD28P10747 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 AC002472.4-201ENST00000641915 272 ntBASIC10.87□□□□□ -0.67
CD28P10747 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 FUCA1P1-201ENST00000374476 1351 ntBASIC10.87□□□□□ -0.67
CD28P10747 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC10.87□□□□□ -0.67
CD28P10747 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CD28P10747 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CD28P10747 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms