Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA4P06727 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
APOA4P06727 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
APOA4P06727 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA4P06727 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
APOA4P06727 ZNF493-208ENST00000599461 1769 ntBASIC13.96□□□□□ -0.18
APOA4P06727 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
APOA4P06727 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA4P06727 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA4P06727 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA4P06727 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.95□□□□□ -0.18
APOA4P06727 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 AC073869.1-201ENST00000415574 2762 ntBASIC13.95□□□□□ -0.18
APOA4P06727 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.95□□□□□ -0.18
APOA4P06727 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.95□□□□□ -0.18
APOA4P06727 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.95□□□□□ -0.18
APOA4P06727 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.95□□□□□ -0.18
APOA4P06727 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.95□□□□□ -0.18
APOA4P06727 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
APOA4P06727 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.95□□□□□ -0.18
APOA4P06727 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 AL596276.2-201ENST00000447525 331 ntBASIC13.95□□□□□ -0.18
APOA4P06727 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.95□□□□□ -0.18
APOA4P06727 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.95□□□□□ -0.18
APOA4P06727 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
APOA4P06727 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 RN7SL774P-201ENST00000577467 290 ntBASIC13.95□□□□□ -0.18
APOA4P06727 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.95□□□□□ -0.18
APOA4P06727 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.95□□□□□ -0.18
APOA4P06727 GPR182-203ENST00000622922 591 ntBASIC13.95□□□□□ -0.18
APOA4P06727 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.95□□□□□ -0.18
APOA4P06727 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
APOA4P06727 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
APOA4P06727 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.95□□□□□ -0.18
APOA4P06727 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.95□□□□□ -0.18
APOA4P06727 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
APOA4P06727 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOA4P06727 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.94□□□□□ -0.18
APOA4P06727 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.94□□□□□ -0.18
APOA4P06727 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
APOA4P06727 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
APOA4P06727 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.94□□□□□ -0.18
APOA4P06727 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.94□□□□□ -0.18
APOA4P06727 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.94□□□□□ -0.18
APOA4P06727 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.94□□□□□ -0.18
APOA4P06727 AC006987.1-201ENST00000413610 527 ntBASIC13.94□□□□□ -0.18
APOA4P06727 CYP46A4P-201ENST00000414953 267 ntBASIC13.94□□□□□ -0.18
APOA4P06727 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOA4P06727 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.94□□□□□ -0.18
APOA4P06727 ISCA2P1-201ENST00000425548 448 ntBASIC13.94□□□□□ -0.18
APOA4P06727 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms