Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
APOA1P02647 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 AC020910.5-201ENST00000623668 1865 ntBASIC12.4□□□□□ -0.42
APOA1P02647 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 LINC00563-201ENST00000566370 1400 ntBASIC12.4□□□□□ -0.42
APOA1P02647 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
APOA1P02647 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 KRT18P13-201ENST00000400056 1290 ntBASIC12.4□□□□□ -0.42
APOA1P02647 MIR940-201ENST00000401276 94 ntBASIC12.4□□□□□ -0.42
APOA1P02647 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.4□□□□□ -0.42
APOA1P02647 TPM4P1-201ENST00000436100 807 ntBASIC12.4□□□□□ -0.42
APOA1P02647 MESTP3-201ENST00000503460 968 ntBASIC12.4□□□□□ -0.42
APOA1P02647 AC027369.6-201ENST00000525520 931 ntBASIC12.4□□□□□ -0.42
APOA1P02647 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.4□□□□□ -0.42
APOA1P02647 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.4□□□□□ -0.42
APOA1P02647 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
APOA1P02647 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.4□□□□□ -0.42
APOA1P02647 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.4□□□□□ -0.42
APOA1P02647 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.4□□□□□ -0.42
APOA1P02647 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.4□□□□□ -0.42
APOA1P02647 SRD5A3P1-201ENST00000603021 949 ntBASIC12.4□□□□□ -0.42
APOA1P02647 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.4□□□□□ -0.42
APOA1P02647 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
APOA1P02647 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
APOA1P02647 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
APOA1P02647 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC12.4□□□□□ -0.42
APOA1P02647 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.4□□□□□ -0.42
APOA1P02647 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC12.4□□□□□ -0.42
APOA1P02647 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOA1P02647 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.4□□□□□ -0.43
APOA1P02647 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
APOA1P02647 AC061965.1-201ENST00000560524 1465 ntBASIC12.4□□□□□ -0.43
APOA1P02647 AC025183.3-201ENST00000623526 1482 ntBASIC12.4□□□□□ -0.43
APOA1P02647 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.4□□□□□ -0.43
APOA1P02647 AC005696.4-201ENST00000614400 3147 ntBASIC12.4□□□□□ -0.43
APOA1P02647 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC12.39□□□□□ -0.43
APOA1P02647 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 ZNF493-208ENST00000599461 1769 ntBASIC12.39□□□□□ -0.43
APOA1P02647 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.39□□□□□ -0.43
APOA1P02647 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.39□□□□□ -0.43
APOA1P02647 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 AC134915.1-201ENST00000426461 574 ntBASIC12.39□□□□□ -0.43
APOA1P02647 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.39□□□□□ -0.43
APOA1P02647 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 AL589987.1-201ENST00000453380 819 ntBASIC12.39□□□□□ -0.43
APOA1P02647 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.39□□□□□ -0.43
APOA1P02647 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.39□□□□□ -0.43
APOA1P02647 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.39□□□□□ -0.43
APOA1P02647 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.39□□□□□ -0.43
APOA1P02647 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms