Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
RCL1Q9Y2P8 AL583810.2-201ENST00000556430 3254 ntBASIC11.4□□□□□ -0.59
RCL1Q9Y2P8 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RCL1Q9Y2P8 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 AC008040.5-201ENST00000599781 1781 ntBASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 CTBP2P3-201ENST00000585629 1255 ntBASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
RCL1Q9Y2P8 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AC026992.2-203ENST00000563004 2419 ntBASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AL139158.3-201ENST00000641212 1562 ntBASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
RCL1Q9Y2P8 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms