Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 AL035696.2-201ENST00000407941 709 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 AL691447.1-201ENST00000419456 387 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 FTH1P22-201ENST00000456305 520 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RPL18AP8-201ENST00000486071 528 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RN7SL440P-201ENST00000577855 343 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 KRT18P8-201ENST00000581937 1246 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 AC009145.4-201ENST00000625119 1294 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 NCLP1-201ENST00000445357 1963 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 MIR1227-201ENST00000408484 88 ntBASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 AL031713.1-201ENST00000564813 661 ntBASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 ACTG1P22-201ENST00000603793 1099 ntBASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 AL805961.1-201ENST00000642026 753 ntBASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 SALL4P6-201ENST00000429385 1691 ntBASIC13.5□□□□□ -0.25
CUEDC1Q9NWM3 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms