Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
VGLL1Q99990 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
VGLL1Q99990 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 AC060814.4-201ENST00000594169 2163 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 SNORA50C-201ENST00000408535 133 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC10.61□□□□□ -0.71
VGLL1Q99990 AC092580.1-201ENST00000433998 658 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 KRT43P-201ENST00000434019 910 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC10.61□□□□□ -0.71
VGLL1Q99990 AC012441.2-201ENST00000444843 739 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 AC006122.1-201ENST00000493323 440 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC10.61□□□□□ -0.71
VGLL1Q99990 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 AL160314.3-201ENST00000556041 767 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC10.61□□□□□ -0.71
VGLL1Q99990 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC10.61□□□□□ -0.71
VGLL1Q99990 AL596325.1-201ENST00000563991 1082 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC10.61□□□□□ -0.71
VGLL1Q99990 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC10.61□□□□□ -0.71
VGLL1Q99990 LINC02084-201ENST00000606069 1096 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC10.61□□□□□ -0.71
VGLL1Q99990 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 AC133540.1-201ENST00000620845 1019 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 SNORA50.1-201ENST00000628590 135 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 RPL35-206ENST00000629845 340 ntTSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
VGLL1Q99990 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC10.61□□□□□ -0.71
VGLL1Q99990 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC10.61□□□□□ -0.71
VGLL1Q99990 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 AC104758.3-203ENST00000562938 2123 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 AL645937.6-201ENST00000641122 3727 ntBASIC10.61□□□□□ -0.71
VGLL1Q99990 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC10.61□□□□□ -0.71
VGLL1Q99990 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VGLL1Q99990 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
VGLL1Q99990 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
VGLL1Q99990 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 AP003969.2-201ENST00000623739 2275 ntBASIC10.6□□□□□ -0.71
VGLL1Q99990 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC10.6□□□□□ -0.71
VGLL1Q99990 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
VGLL1Q99990 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
VGLL1Q99990 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC10.6□□□□□ -0.71
VGLL1Q99990 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VGLL1Q99990 OR2R1P-201ENST00000441404 914 ntBASIC10.6□□□□□ -0.71
VGLL1Q99990 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC10.6□□□□□ -0.71
VGLL1Q99990 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC10.6□□□□□ -0.71
VGLL1Q99990 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC10.6□□□□□ -0.71
VGLL1Q99990 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms