Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ATP6V0A1Q93050 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 ACTBP14-201ENST00000411655 1089 ntBASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 AC040160.2-201ENST00000623816 1675 ntBASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A1Q93050 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 AC020763.3-201ENST00000625095 2904 ntBASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 KRT18P37-201ENST00000520711 1282 ntBASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 CES1P2-201ENST00000566467 1242 ntBASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 AC010632.2-201ENST00000588369 1224 ntBASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 AL356740.1-201ENST00000602192 1297 ntBASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 HMGB1P24-201ENST00000611897 328 ntBASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A1Q93050 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms