Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 CXXC1P1-202ENST00000489409 1212 ntBASIC21.18■□□□□ 0.98
VPS8Q8N3P4 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 MEP1AP1-201ENST00000636082 1097 ntBASIC21.18■□□□□ 0.98
VPS8Q8N3P4 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS8Q8N3P4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 KRT8P38-201ENST00000441370 1430 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 SNORA50D-201ENST00000408059 134 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 AC010086.2-201ENST00000428616 226 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 AC114781.1-201ENST00000450559 1028 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 RPL35P1-201ENST00000450819 370 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 AC025594.1-201ENST00000469533 543 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 RN7SL288P-201ENST00000490496 291 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 AL137779.3-201ENST00000553295 729 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 AL022344.2-201ENST00000568976 968 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 AC139713.2-207ENST00000641556 1292 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 AL022323.5-201ENST00000624101 2059 ntBASIC21.17■□□□□ 0.98
VPS8Q8N3P4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS8Q8N3P4 BEND3P3-201ENST00000611030 2440 ntBASIC21.16■□□□□ 0.98
VPS8Q8N3P4 AC020658.7-201ENST00000624274 2442 ntBASIC21.16■□□□□ 0.98
VPS8Q8N3P4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 MIR566-201ENST00000385187 94 ntBASIC21.16■□□□□ 0.98
VPS8Q8N3P4 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 HKR1-225ENST00000592168 566 ntTSL 4 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 PEBP1P2-201ENST00000603980 558 ntBASIC21.16■□□□□ 0.98
VPS8Q8N3P4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 STX3-207ENST00000633708 3111 ntTSL 5 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS8Q8N3P4 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 GOLGA6L16P-201ENST00000441780 1299 ntBASIC21.15■□□□□ 0.98
VPS8Q8N3P4 OR4A49P-201ENST00000527050 632 ntBASIC21.15■□□□□ 0.98
VPS8Q8N3P4 DNM1P51-201ENST00000558149 522 ntBASIC21.15■□□□□ 0.98
VPS8Q8N3P4 AC104758.3-203ENST00000562938 2123 ntBASIC21.15■□□□□ 0.98
VPS8Q8N3P4 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 KRT8P34-201ENST00000577607 1044 ntBASIC21.15■□□□□ 0.98
VPS8Q8N3P4 MIR5091-201ENST00000578707 93 ntBASIC21.15■□□□□ 0.98
VPS8Q8N3P4 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS8Q8N3P4 BX322534.1-201ENST00000635574 241 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms