Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 AL118558.3-201ENST00000607414 1079 ntBASIC12.44□□□□□ -0.42
LRRC28Q86X40 AL022328.3-201ENST00000607943 679 ntBASIC12.44□□□□□ -0.42
LRRC28Q86X40 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 AC005695.3-201ENST00000614522 232 ntBASIC12.44□□□□□ -0.42
LRRC28Q86X40 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.44□□□□□ -0.42
LRRC28Q86X40 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 SALL4P6-201ENST00000429385 1691 ntBASIC12.44□□□□□ -0.42
LRRC28Q86X40 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 AC009093.10-201ENST00000641956 1442 ntBASIC12.44□□□□□ -0.42
LRRC28Q86X40 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LRRC28Q86X40 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
LRRC28Q86X40 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 SHC1P1-201ENST00000425230 1745 ntBASIC12.43□□□□□ -0.42
LRRC28Q86X40 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AP001972.5-201ENST00000624624 2338 ntBASIC12.43□□□□□ -0.42
LRRC28Q86X40 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AC061965.1-201ENST00000560524 1465 ntBASIC12.43□□□□□ -0.42
LRRC28Q86X40 AC025183.3-201ENST00000623526 1482 ntBASIC12.43□□□□□ -0.42
LRRC28Q86X40 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.43□□□□□ -0.42
LRRC28Q86X40 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AL008638.5-201ENST00000623814 1298 ntBASIC12.43□□□□□ -0.42
LRRC28Q86X40 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.43□□□□□ -0.42
LRRC28Q86X40 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 AC020907.1-201ENST00000616460 1350 ntBASIC12.43□□□□□ -0.42
LRRC28Q86X40 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LRRC28Q86X40 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms