Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO4Q2I0M5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
RSPO4Q2I0M5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO4Q2I0M5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 IMPDH1P5-201ENST00000439688 1540 ntBASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SERPINB8P1-201ENST00000401898 377 ntBASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 RBMX2P5-201ENST00000424312 969 ntBASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AC079250.1-201ENST00000456046 531 ntBASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 KRT18P42-201ENST00000505048 1255 ntBASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AC098591.1-202ENST00000507914 937 ntBASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SORD2P-201ENST00000558556 1069 ntBASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AC006273.1-201ENST00000606966 861 ntBASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 AC015813.5-201ENST00000624641 1514 ntBASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO4Q2I0M5 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AC015909.5-201ENST00000624336 2266 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AC097359.2-201ENST00000604992 2389 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AL513477.1-201ENST00000602865 2407 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 POLR3DP1-201ENST00000398689 1176 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AL391903.1-201ENST00000407513 365 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 EEF1GP1-201ENST00000457231 1299 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AC017007.3-201ENST00000479865 435 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 RN7SL477P-201ENST00000488440 286 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 NDUFB2P1-201ENST00000506966 295 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AL512310.5-201ENST00000551999 515 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms