Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 KRT18P8-201ENST00000581937 1246 ntBASIC12.11□□□□□ -0.47
UBA52P62987 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.11□□□□□ -0.47
UBA52P62987 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
UBA52P62987 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 AL023803.2-201ENST00000620080 638 ntBASIC12.11□□□□□ -0.47
UBA52P62987 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.11□□□□□ -0.47
UBA52P62987 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 FAM90A11P-201ENST00000518378 2218 ntBASIC12.11□□□□□ -0.47
UBA52P62987 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 AGAP12P-201ENST00000585227 2359 ntBASIC12.11□□□□□ -0.47
UBA52P62987 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 AGGF1P10-201ENST00000635005 2191 ntBASIC12.11□□□□□ -0.47
UBA52P62987 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.1□□□□□ -0.47
UBA52P62987 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
UBA52P62987 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
UBA52P62987 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
UBA52P62987 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
UBA52P62987 KRT8P29-201ENST00000420409 1371 ntBASIC12.1□□□□□ -0.47
UBA52P62987 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
UBA52P62987 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 AL136309.1-201ENST00000403917 691 ntBASIC12.1□□□□□ -0.47
UBA52P62987 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.1□□□□□ -0.47
UBA52P62987 AC011742.3-201ENST00000439053 820 ntBASIC12.1□□□□□ -0.47
UBA52P62987 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.1□□□□□ -0.47
UBA52P62987 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 AC106794.1-201ENST00000506935 792 ntBASIC12.1□□□□□ -0.47
UBA52P62987 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.1□□□□□ -0.47
UBA52P62987 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.1□□□□□ -0.47
UBA52P62987 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.1□□□□□ -0.47
UBA52P62987 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.1□□□□□ -0.47
UBA52P62987 AC106820.3-201ENST00000561653 397 ntBASIC12.1□□□□□ -0.47
UBA52P62987 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.1□□□□□ -0.47
UBA52P62987 SAMD11P1-201ENST00000571429 661 ntBASIC12.1□□□□□ -0.47
UBA52P62987 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.1□□□□□ -0.47
UBA52P62987 MIR4706-201ENST00000582134 82 ntBASIC12.1□□□□□ -0.47
UBA52P62987 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.1□□□□□ -0.47
UBA52P62987 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
UBA52P62987 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
UBA52P62987 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
UBA52P62987 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.1□□□□□ -0.47
UBA52P62987 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.1□□□□□ -0.47
UBA52P62987 DNM1P41-201ENST00000623634 3350 ntBASIC12.1□□□□□ -0.47
UBA52P62987 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 TUBBP5-203ENST00000508529 1334 ntBASIC12.1□□□□□ -0.47
UBA52P62987 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBA52P62987 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.09□□□□□ -0.47
UBA52P62987 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms