Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.9□□□□□ -0.02
SSR1P43307 FAM90A7P-201ENST00000382628 1395 ntBASIC14.9□□□□□ -0.02
SSR1P43307 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 FAM90A23P-201ENST00000400136 1395 ntBASIC14.9□□□□□ -0.02
SSR1P43307 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SSR1P43307 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.9□□□□□ -0.02
SSR1P43307 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 ALK-205ENST00000618119 4646 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SSR1P43307 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SSR1P43307 AC103592.1-201ENST00000394513 664 ntBASIC14.9□□□□□ -0.02
SSR1P43307 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.9□□□□□ -0.02
SSR1P43307 VDAC1P1-201ENST00000439229 848 ntBASIC14.9□□□□□ -0.02
SSR1P43307 AC104073.2-201ENST00000453737 312 ntBASIC14.9□□□□□ -0.02
SSR1P43307 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.9□□□□□ -0.02
SSR1P43307 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.9□□□□□ -0.02
SSR1P43307 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.9□□□□□ -0.02
SSR1P43307 CR392039.2-201ENST00000623182 509 ntBASIC14.9□□□□□ -0.02
SSR1P43307 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SSR1P43307 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.9□□□□□ -0.02
SSR1P43307 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SSR1P43307 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SSR1P43307 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.89□□□□□ -0.03
SSR1P43307 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSR1P43307 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.89□□□□□ -0.03
SSR1P43307 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSR1P43307 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.89□□□□□ -0.03
SSR1P43307 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 XBP1P1-201ENST00000436573 652 ntBASIC14.89□□□□□ -0.03
SSR1P43307 GOLGA2P4-201ENST00000441462 777 ntBASIC14.89□□□□□ -0.03
SSR1P43307 ATP5G2P4-201ENST00000442175 420 ntBASIC14.89□□□□□ -0.03
SSR1P43307 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.89□□□□□ -0.03
SSR1P43307 FAM86HP-204ENST00000513466 959 ntBASIC14.89□□□□□ -0.03
SSR1P43307 RN7SL163P-201ENST00000583100 276 ntBASIC14.89□□□□□ -0.03
SSR1P43307 AC005324.6-201ENST00000587972 613 ntBASIC14.89□□□□□ -0.03
SSR1P43307 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSR1P43307 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.89□□□□□ -0.03
SSR1P43307 BNIP3P13-201ENST00000599968 566 ntBASIC14.89□□□□□ -0.03
SSR1P43307 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.89□□□□□ -0.03
SSR1P43307 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSR1P43307 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SSR1P43307 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.89□□□□□ -0.03
SSR1P43307 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSR1P43307 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSR1P43307 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSR1P43307 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.89□□□□□ -0.03
SSR1P43307 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR1P43307 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSR1P43307 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms