Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 MSNP1-201ENST00000511640 1732 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 PYY2-201ENST00000315776 282 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 OR2W2P-201ENST00000406313 909 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBEC1P41238 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBEC1P41238 AC092573.1-201ENST00000433054 884 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 UPF3AP2-201ENST00000457924 1132 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 RN7SL81P-201ENST00000493781 261 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 AC134698.3-201ENST00000523880 214 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBEC1P41238 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.55□□□□□ -0.4
APOBEC1P41238 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBEC1P41238 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBEC1P41238 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC1P41238 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC1P41238 AC012073.1-201ENST00000606114 1108 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 AC051619.9-201ENST00000623237 597 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBEC1P41238 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBEC1P41238 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC1P41238 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
APOBEC1P41238 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 AC027612.1-201ENST00000445234 2395 ntBASIC12.55□□□□□ -0.4
APOBEC1P41238 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC1P41238 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBEC1P41238 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC1P41238 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
APOBEC1P41238 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 TCAF1P1-201ENST00000414990 2232 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.54□□□□□ -0.4
APOBEC1P41238 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 LINC00638-201ENST00000555578 2518 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 DKKL1P1-201ENST00000400550 698 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 EEF1DP2-201ENST00000433698 843 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 CHCHD2P9-201ENST00000461726 456 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 IMP3P2-201ENST00000489760 475 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.54□□□□□ -0.4
APOBEC1P41238 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
APOBEC1P41238 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC1P41238 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.54□□□□□ -0.4
APOBEC1P41238 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.54□□□□□ -0.4
APOBEC1P41238 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.54□□□□□ -0.4
APOBEC1P41238 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 AC103810.10-201ENST00000606504 343 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 AL359091.4-201ENST00000610052 409 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC1P41238 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
APOBEC1P41238 ODCP-201ENST00000459650 1639 ntBASIC12.54□□□□□ -0.4
APOBEC1P41238 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms