Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLCN1P35523 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN1P35523 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CLCN1P35523 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLCN1P35523 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLCN1P35523 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 CNN2P8-201ENST00000421872 913 ntBASIC15.85■□□□□ 0.13
CLCN1P35523 FAM197Y7-201ENST00000432892 766 ntBASIC15.85■□□□□ 0.13
CLCN1P35523 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.85■□□□□ 0.13
CLCN1P35523 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC15.85■□□□□ 0.13
CLCN1P35523 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.85■□□□□ 0.13
CLCN1P35523 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN1P35523 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN1P35523 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN1P35523 POM121L7P-201ENST00000329949 2404 ntBASIC15.85■□□□□ 0.13
CLCN1P35523 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLCN1P35523 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN1P35523 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC15.85■□□□□ 0.13
CLCN1P35523 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CLCN1P35523 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CLCN1P35523 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 AC016694.1-201ENST00000434179 700 ntBASIC15.84■□□□□ 0.13
CLCN1P35523 ALG3P1-201ENST00000508806 1114 ntBASIC15.84■□□□□ 0.13
CLCN1P35523 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.84■□□□□ 0.13
CLCN1P35523 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.84■□□□□ 0.13
CLCN1P35523 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN1P35523 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.84■□□□□ 0.13
CLCN1P35523 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.84■□□□□ 0.13
CLCN1P35523 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN1P35523 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 AC105233.6-201ENST00000642093 218 ntBASIC15.84■□□□□ 0.13
CLCN1P35523 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLCN1P35523 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLCN1P35523 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN1P35523 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
CLCN1P35523 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 AL357054.4-201ENST00000606285 2814 ntBASIC15.84■□□□□ 0.13
CLCN1P35523 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
CLCN1P35523 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN1P35523 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CLCN1P35523 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLCN1P35523 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN1P35523 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN1P35523 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CLCN1P35523 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.83■□□□□ 0.13
CLCN1P35523 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC15.83■□□□□ 0.13
CLCN1P35523 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN1P35523 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN1P35523 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN1P35523 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC15.83■□□□□ 0.13
CLCN1P35523 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN1P35523 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 AC139712.1-201ENST00000378256 1875 ntBASIC15.83■□□□□ 0.12
CLCN1P35523 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms