Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1EP28566 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.37□□□□□ -0.27
HTR1EP28566 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1EP28566 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HTR1EP28566 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.37□□□□□ -0.27
HTR1EP28566 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1EP28566 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1EP28566 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1EP28566 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1EP28566 ZNF493-208ENST00000599461 1769 ntBASIC13.37□□□□□ -0.27
HTR1EP28566 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
HTR1EP28566 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.37□□□□□ -0.27
HTR1EP28566 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1EP28566 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HTR1EP28566 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HTR1EP28566 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.37□□□□□ -0.27
HTR1EP28566 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 SHC1P1-201ENST00000425230 1745 ntBASIC13.36□□□□□ -0.27
HTR1EP28566 MARK2P16-201ENST00000605714 1723 ntBASIC13.36□□□□□ -0.27
HTR1EP28566 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.36□□□□□ -0.27
HTR1EP28566 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1EP28566 LINC00638-201ENST00000555578 2518 ntBASIC13.36□□□□□ -0.27
HTR1EP28566 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
HTR1EP28566 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1EP28566 AC069218.1-201ENST00000435269 762 ntBASIC13.36□□□□□ -0.27
HTR1EP28566 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1EP28566 HIST2H2BB-201ENST00000449108 381 ntBASIC13.36□□□□□ -0.27
HTR1EP28566 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.36□□□□□ -0.27
HTR1EP28566 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.36□□□□□ -0.27
HTR1EP28566 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1EP28566 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1EP28566 IQSEC3P1-201ENST00000538799 536 ntBASIC13.36□□□□□ -0.27
HTR1EP28566 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1EP28566 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.36□□□□□ -0.27
HTR1EP28566 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.36□□□□□ -0.27
HTR1EP28566 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.36□□□□□ -0.27
HTR1EP28566 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 AC073413.1-201ENST00000603927 732 ntBASIC13.36□□□□□ -0.27
HTR1EP28566 AC026740.1-201ENST00000607068 791 ntBASIC13.36□□□□□ -0.27
HTR1EP28566 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HTR1EP28566 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HTR1EP28566 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HTR1EP28566 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.36□□□□□ -0.27
HTR1EP28566 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HTR1EP28566 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR1EP28566 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.35□□□□□ -0.27
HTR1EP28566 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.35□□□□□ -0.27
HTR1EP28566 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.35□□□□□ -0.27
HTR1EP28566 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.35□□□□□ -0.27
HTR1EP28566 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR1EP28566 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms