Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.62□□□□□ -0.23
PCNAP12004 AC004898.1-201ENST00000451057 766 ntBASIC13.62□□□□□ -0.23
PCNAP12004 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.62□□□□□ -0.23
PCNAP12004 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.62□□□□□ -0.23
PCNAP12004 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.62□□□□□ -0.23
PCNAP12004 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 AC243960.2-201ENST00000600996 747 ntBASIC13.62□□□□□ -0.23
PCNAP12004 AL022334.2-201ENST00000610000 484 ntBASIC13.62□□□□□ -0.23
PCNAP12004 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.62□□□□□ -0.23
PCNAP12004 MIR6752-201ENST00000618442 71 ntBASIC13.62□□□□□ -0.23
PCNAP12004 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.62□□□□□ -0.23
PCNAP12004 NAP1L6-202ENST00000641404 1222 ntBASIC13.62□□□□□ -0.23
PCNAP12004 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.62□□□□□ -0.23
PCNAP12004 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PCNAP12004 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.62□□□□□ -0.23
PCNAP12004 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
PCNAP12004 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.62□□□□□ -0.23
PCNAP12004 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
PCNAP12004 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PCNAP12004 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
PCNAP12004 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNAP12004 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PCNAP12004 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 TNRC18P1-201ENST00000502875 3650 ntBASIC13.61□□□□□ -0.23
PCNAP12004 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.61□□□□□ -0.23
PCNAP12004 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.61□□□□□ -0.23
PCNAP12004 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PCNAP12004 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.61□□□□□ -0.23
PCNAP12004 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 RN7SKP214-201ENST00000364208 315 ntBASIC13.61□□□□□ -0.23
PCNAP12004 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.61□□□□□ -0.23
PCNAP12004 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.61□□□□□ -0.23
PCNAP12004 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.61□□□□□ -0.23
PCNAP12004 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.61□□□□□ -0.23
PCNAP12004 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
PCNAP12004 AC093752.3-201ENST00000567343 901 ntBASIC13.61□□□□□ -0.23
PCNAP12004 MIR3188-201ENST00000583494 85 ntBASIC13.61□□□□□ -0.23
PCNAP12004 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
PCNAP12004 AC026740.1-201ENST00000607068 791 ntBASIC13.61□□□□□ -0.23
PCNAP12004 AC138649.2-201ENST00000615886 705 ntBASIC13.61□□□□□ -0.23
PCNAP12004 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.61□□□□□ -0.23
PCNAP12004 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
PCNAP12004 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PCNAP12004 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PCNAP12004 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.61□□□□□ -0.23
PCNAP12004 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 RPL13AP3-202ENST00000494676 1473 ntBASIC13.61□□□□□ -0.23
PCNAP12004 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.61□□□□□ -0.23
PCNAP12004 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PCNAP12004 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PCNAP12004 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.6□□□□□ -0.23
PCNAP12004 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCNAP12004 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PCNAP12004 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PCNAP12004 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PCNAP12004 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.6□□□□□ -0.23
PCNAP12004 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms