Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AL132657.2-201ENST00000564417 358 ntBASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 NUDT4P2-201ENST00000578341 546 ntBASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 TEKT4P2-202ENST00000559466 1312 ntBASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCNYL3P0C7X3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCNYL3P0C7X3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCNYL3P0C7X3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CCNYL3P0C7X3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCNYL3P0C7X3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCNYL3P0C7X3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCNYL3P0C7X3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.58□□□□□ -0.23
CCNYL3P0C7X3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCNYL3P0C7X3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 STRCP1-201ENST00000509801 5328 ntBASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 FP325330.2-201ENST00000624219 5630 ntBASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 KRT8P24-201ENST00000560290 1559 ntBASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCNYL3P0C7X3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms