Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC013553.1-201ENST00000560906 267 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.59□□□□□ -0.39
FREM3P0C091 MIR4649-201ENST00000582839 64 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 AC010976.2-201ENST00000609697 852 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
FREM3P0C091 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 CICP8-201ENST00000455800 2813 ntBASIC12.59□□□□□ -0.39
FREM3P0C091 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
FREM3P0C091 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.59□□□□□ -0.39
FREM3P0C091 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.59□□□□□ -0.39
FREM3P0C091 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
FREM3P0C091 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
FREM3P0C091 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
FREM3P0C091 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.58□□□□□ -0.39
FREM3P0C091 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
FREM3P0C091 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
FREM3P0C091 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
FREM3P0C091 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.58□□□□□ -0.39
FREM3P0C091 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
FREM3P0C091 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
FREM3P0C091 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
FREM3P0C091 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.58□□□□□ -0.4
FREM3P0C091 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 KRT18P8-201ENST00000581937 1246 ntBASIC12.58□□□□□ -0.4
FREM3P0C091 RN7SL556P-201ENST00000582856 298 ntBASIC12.58□□□□□ -0.4
FREM3P0C091 AC103810.10-201ENST00000606504 343 ntBASIC12.58□□□□□ -0.4
FREM3P0C091 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
FREM3P0C091 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.58□□□□□ -0.4
FREM3P0C091 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 CICP20-201ENST00000443330 2801 ntBASIC12.58□□□□□ -0.4
FREM3P0C091 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 PES1P2-201ENST00000449745 1735 ntBASIC12.58□□□□□ -0.4
FREM3P0C091 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 AL137784.3-201ENST00000623858 2288 ntBASIC12.58□□□□□ -0.4
FREM3P0C091 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.58□□□□□ -0.4
FREM3P0C091 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.58□□□□□ -0.4
FREM3P0C091 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.58□□□□□ -0.4
FREM3P0C091 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.58□□□□□ -0.4
FREM3P0C091 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.58□□□□□ -0.4
FREM3P0C091 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.58□□□□□ -0.4
FREM3P0C091 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
FREM3P0C091 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.58□□□□□ -0.4
FREM3P0C091 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.57□□□□□ -0.4
FREM3P0C091 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.57□□□□□ -0.4
FREM3P0C091 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.57□□□□□ -0.4
FREM3P0C091 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.57□□□□□ -0.4
FREM3P0C091 OR2I1P-209ENST00000641730 5365 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.57□□□□□ -0.4
FREM3P0C091 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.57□□□□□ -0.4
FREM3P0C091 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms