Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CD3DP04234 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.8□□□□□ -0.52
CD3DP04234 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC11.8□□□□□ -0.52
CD3DP04234 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.8□□□□□ -0.52
CD3DP04234 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.8□□□□□ -0.52
CD3DP04234 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.8□□□□□ -0.52
CD3DP04234 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.8□□□□□ -0.52
CD3DP04234 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.8□□□□□ -0.52
CD3DP04234 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.8□□□□□ -0.52
CD3DP04234 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 AC087499.6-201ENST00000411576 835 ntBASIC11.8□□□□□ -0.52
CD3DP04234 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.8□□□□□ -0.52
CD3DP04234 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 AL590640.2-201ENST00000457038 527 ntBASIC11.8□□□□□ -0.52
CD3DP04234 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 AC106760.1-201ENST00000508690 800 ntBASIC11.8□□□□□ -0.52
CD3DP04234 AC093214.1-201ENST00000511688 1107 ntBASIC11.8□□□□□ -0.52
CD3DP04234 RNA5SP486-201ENST00000515961 83 ntBASIC11.8□□□□□ -0.52
CD3DP04234 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 PTP4A1P2-201ENST00000546033 454 ntBASIC11.8□□□□□ -0.52
CD3DP04234 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.8□□□□□ -0.52
CD3DP04234 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.8□□□□□ -0.52
CD3DP04234 RN7SL713P-201ENST00000582127 302 ntBASIC11.8□□□□□ -0.52
CD3DP04234 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
CD3DP04234 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.8□□□□□ -0.52
CD3DP04234 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.8□□□□□ -0.52
CD3DP04234 AC007541.1-201ENST00000570282 1469 ntBASIC11.8□□□□□ -0.52
CD3DP04234 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CD3DP04234 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.8□□□□□ -0.52
CD3DP04234 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.8□□□□□ -0.52
CD3DP04234 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.8□□□□□ -0.52
CD3DP04234 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.8□□□□□ -0.52
CD3DP04234 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.8□□□□□ -0.52
CD3DP04234 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.8□□□□□ -0.52
CD3DP04234 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CD3DP04234 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.79□□□□□ -0.52
CD3DP04234 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.79□□□□□ -0.52
CD3DP04234 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
CD3DP04234 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CD3DP04234 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 CTAGE13P-201ENST00000416709 2446 ntBASIC11.79□□□□□ -0.52
CD3DP04234 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CD3DP04234 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.79□□□□□ -0.52
CD3DP04234 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD3DP04234 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.79□□□□□ -0.52
CD3DP04234 SPTLC1P1-201ENST00000447199 261 ntBASIC11.79□□□□□ -0.52
CD3DP04234 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 COX5BP1-201ENST00000507622 393 ntBASIC11.79□□□□□ -0.52
CD3DP04234 AC025279.2-201ENST00000569730 653 ntBASIC11.79□□□□□ -0.52
CD3DP04234 AC132192.2-201ENST00000596206 1147 ntBASIC11.79□□□□□ -0.52
CD3DP04234 AL132655.2-201ENST00000596276 594 ntBASIC11.79□□□□□ -0.52
CD3DP04234 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.79□□□□□ -0.52
CD3DP04234 AL356740.1-201ENST00000602192 1297 ntBASIC11.79□□□□□ -0.52
CD3DP04234 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms