Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC8.22□□□□□ -1.09
APOBP04114 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
APOBP04114 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC8.22□□□□□ -1.09
APOBP04114 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC8.22□□□□□ -1.09
APOBP04114 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC8.21□□□□□ -1.09
APOBP04114 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
APOBP04114 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC8.21□□□□□ -1.09
APOBP04114 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 AP001610.1-201ENST00000411427 1116 ntTSL 5 BASIC8.21□□□□□ -1.09
APOBP04114 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
APOBP04114 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC8.21□□□□□ -1.09
APOBP04114 ASS1P9-201ENST00000513426 1236 ntBASIC8.21□□□□□ -1.09
APOBP04114 AC080023.2-201ENST00000532615 208 ntBASIC8.21□□□□□ -1.09
APOBP04114 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 AC244102.2-201ENST00000597568 955 ntBASIC8.21□□□□□ -1.09
APOBP04114 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
APOBP04114 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC8.21□□□□□ -1.09
APOBP04114 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 AGAP10P-201ENST00000454844 2418 ntBASIC8.21□□□□□ -1.09
APOBP04114 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC8.21□□□□□ -1.09
APOBP04114 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
APOBP04114 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC8.21□□□□□ -1.09
APOBP04114 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
APOBP04114 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 STK3-218ENST00000617590 2485 ntTSL 5 BASIC8.21□□□□□ -1.1
APOBP04114 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 CXorf40B-201ENST00000355203 1067 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.1
APOBP04114 RPSAP46-201ENST00000428316 882 ntBASIC8.21□□□□□ -1.1
APOBP04114 AKR1C6P-201ENST00000432950 983 ntBASIC8.21□□□□□ -1.1
APOBP04114 CMC2-202ENST00000486645 766 ntTSL 3 BASIC8.21□□□□□ -1.1
APOBP04114 RBP5-202ENST00000542370 564 ntTSL 2 BASIC8.21□□□□□ -1.1
APOBP04114 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC8.21□□□□□ -1.1
APOBP04114 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.1
APOBP04114 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC8.21□□□□□ -1.1
APOBP04114 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC8.21□□□□□ -1.1
APOBP04114 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
APOBP04114 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC8.21□□□□□ -1.1
APOBP04114 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
APOBP04114 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 AC090643.2-201ENST00000623442 2029 ntBASIC8.21□□□□□ -1.1
APOBP04114 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC8.21□□□□□ -1.1
APOBP04114 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC8.21□□□□□ -1.1
APOBP04114 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC8.21□□□□□ -1.1
APOBP04114 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 MED20-204ENST00000409312 932 ntTSL 2 BASIC8.21□□□□□ -1.1
APOBP04114 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC8.21□□□□□ -1.1
APOBP04114 AL356583.3-201ENST00000412354 417 ntBASIC8.21□□□□□ -1.1
APOBP04114 AC087893.1-201ENST00000612818 664 ntBASIC8.21□□□□□ -1.1
APOBP04114 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC8.21□□□□□ -1.1
APOBP04114 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
APOBP04114 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC8.21□□□□□ -1.1
APOBP04114 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC8.21□□□□□ -1.1
APOBP04114 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 AC022483.2-201ENST00000461464 555 ntBASIC8.2□□□□□ -1.1
APOBP04114 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC8.2□□□□□ -1.1
APOBP04114 AL357137.1-201ENST00000604645 203 ntBASIC8.2□□□□□ -1.1
APOBP04114 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 CROT-203ENST00000419147 2959 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 POM121L4P-202ENST00000427789 1891 ntBASIC8.2□□□□□ -1.1
APOBP04114 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 PCDHB19P-202ENST00000625133 2914 ntBASIC8.2□□□□□ -1.1
APOBP04114 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
APOBP04114 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
APOBP04114 TUBB8P5-201ENST00000445286 1351 ntBASIC8.2□□□□□ -1.1
APOBP04114 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC8.2□□□□□ -1.1
APOBP04114 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms