Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
A0A1W2PRF3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.51□□□□□ -0.57
A0A1W2PRF3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 CSPG4P11-201ENST00000560634 4910 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC006372.4-201ENST00000624122 1543 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AL139158.3-201ENST00000641212 1562 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 MIR33B-201ENST00000385104 96 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 HLA-DPB2-205ENST00000435074 1188 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 CHCHD2P2-201ENST00000503744 321 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC095040.1-201ENST00000513286 675 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC138701.2-201ENST00000553634 226 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 HERC2P11-201ENST00000562845 725 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC100756.2-201ENST00000569537 736 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 MIR3147-201ENST00000577811 66 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.5□□□□□ -0.57
A0A1W2PRF3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
A0A1W2PRF3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.5□□□□□ -0.57
A0A1W2PRF3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
A0A1W2PRF3 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
A0A1W2PRF3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
A0A1W2PRF3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
A0A1W2PRF3 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
A0A1W2PRF3 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.49□□□□□ -0.57
A0A1W2PRF3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
A0A1W2PRF3 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
A0A1W2PRF3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
A0A1W2PRF3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
A0A1W2PRF3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
A0A1W2PRF3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms