Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 LINC00265-2P-201ENST00000413372 782 ntBASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 AL133467.4-201ENST00000602953 725 ntBASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 AL021707.6-201ENST00000609212 491 ntBASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 AC097724.1-201ENST00000609581 426 ntBASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 PTPRVP-205ENST00000641549 5067 ntBASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 LINC02486-201ENST00000604157 3000 ntBASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.52□□□□□ -0.4
PARPBPQ9NWS1 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 AL807761.2-201ENST00000422849 729 ntBASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 SIGLEC18P-201ENST00000602271 909 ntBASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PARPBPQ9NWS1 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PARPBPQ9NWS1 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms