Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CPNE5Q9HCH3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.52□□□□□ -0.24
CPNE5Q9HCH3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 AC073869.2-201ENST00000417338 1026 ntBASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 AP005264.6-204ENST00000588436 719 ntBASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 AC006548.2-201ENST00000605217 529 ntBASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CPNE5Q9HCH3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 RPL18AP8-201ENST00000486071 528 ntBASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 TREHP1-201ENST00000531328 465 ntBASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 OR5BD1P-201ENST00000532527 817 ntBASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 AC003686.1-201ENST00000550956 1034 ntBASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 MIR2392-201ENST00000584881 84 ntBASIC13.51□□□□□ -0.25
CPNE5Q9HCH3 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms