Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 AC012645.4-201ENST00000610691 1061 ntBASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 Z98257.2-202ENST00000641138 1548 ntBASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
POLR2J2Q9GZM3 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 ZNF493-208ENST00000599461 1769 ntBASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 MIR663B-201ENST00000408361 115 ntBASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 GAPDHP21-201ENST00000450301 1010 ntBASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 Z93015.1-201ENST00000451718 390 ntBASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 AP005482.1-201ENST00000563722 1273 ntBASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 MIR3188-201ENST00000583494 85 ntBASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 AL356740.1-201ENST00000602192 1297 ntBASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 AL161773.1-201ENST00000624845 863 ntBASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 VENTXP1-201ENST00000569334 2716 ntBASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
POLR2J2Q9GZM3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms