Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 AGGF1P10-201ENST00000635005 2191 ntBASIC11.98□□□□□ -0.49
NICN1Q9BSH3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 KRT17P7-201ENST00000451704 1104 ntBASIC11.98□□□□□ -0.49
NICN1Q9BSH3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 APRT-204ENST00000563655 709 ntTSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.98□□□□□ -0.49
NICN1Q9BSH3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NICN1Q9BSH3 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 Z98885.3-201ENST00000624882 1757 ntBASIC11.97□□□□□ -0.49
NICN1Q9BSH3 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AC093462.1-201ENST00000621167 1683 ntBASIC11.97□□□□□ -0.49
NICN1Q9BSH3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AL021155.1-201ENST00000438808 2637 ntBASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.97□□□□□ -0.49
NICN1Q9BSH3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AC012441.2-201ENST00000444843 739 ntBASIC11.97□□□□□ -0.49
NICN1Q9BSH3 RN7SL692P-201ENST00000464677 288 ntBASIC11.97□□□□□ -0.49
NICN1Q9BSH3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.97□□□□□ -0.49
NICN1Q9BSH3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 IGHV3-72-202ENST00000621503 303 ntBASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AL162426.1-201ENST00000624141 743 ntBASIC11.97□□□□□ -0.49
NICN1Q9BSH3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NICN1Q9BSH3 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms