Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 PMF1-201ENST00000368273 884 ntTSL 2 BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 PRDX2P3-201ENST00000515779 586 ntBASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 RN7SL602P-201ENST00000578326 324 ntBASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 RN7SL718P-201ENST00000581254 303 ntBASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 AC026304.1-201ENST00000597953 561 ntBASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 AC092535.4-201ENST00000609548 397 ntBASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC20.86■□□□□ 0.93
FYCO1Q9BQS8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 AC105443.1-201ENST00000433754 712 ntBASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 AC092910.2-201ENST00000491262 348 ntBASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 DGAT2L7P-201ENST00000602462 744 ntBASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 AL137028.2-201ENST00000614601 256 ntBASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 AC139100.2-201ENST00000616901 662 ntBASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 STK25-235ENST00000543554 2556 ntTSL 2 BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 MSNP1-201ENST00000511640 1732 ntBASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FYCO1Q9BQS8 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 KRT18P42-201ENST00000505048 1255 ntBASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 HNRNPA1P4-201ENST00000509706 756 ntBASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 RPS5-205ENST00000598495 800 ntTSL 3 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 ZDHHC8P1-202ENST00000418264 1403 ntBASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 AL050341.2-201ENST00000567508 1541 ntBASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC20.84■□□□□ 0.93
FYCO1Q9BQS8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 RN7SL646P-201ENST00000492969 297 ntBASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 GPX3-202ENST00000517973 612 ntTSL 3 BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 MED11-202ENST00000573708 802 ntTSL 2 BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 AC106782.5-201ENST00000616011 337 ntBASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 AC244097.1-201ENST00000621631 1216 ntBASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
FYCO1Q9BQS8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
FYCO1Q9BQS8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
FYCO1Q9BQS8 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms