Protein–RNA interactions for Protein: Q8IVH2

FOXP4, Forkhead box protein P4, humanhuman

Predicted RBP Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4Q8IVH2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 AK2P2-201ENST00000439142 405 ntBASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 GULOP-201ENST00000454030 748 ntBASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 AC063952.3-201ENST00000467756 308 ntBASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 CSTP2-201ENST00000610599 398 ntBASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 AF013593.1-201ENST00000458074 1487 ntBASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXP4Q8IVH2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 AC068831.5-201ENST00000557387 328 ntBASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 MIR3940-201ENST00000579148 102 ntBASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 AL160191.2-201ENST00000603975 601 ntBASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 AC005252.3-201ENST00000623855 2258 ntBASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXP4Q8IVH2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 AL137784.3-201ENST00000623858 2288 ntBASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXP4Q8IVH2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms