Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 AC015936.2-201ENST00000593177 259 ntBASIC15.66■□□□□ 0.1
TPM4P67936 AC139530.3-201ENST00000620344 690 ntBASIC15.66■□□□□ 0.1
TPM4P67936 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TPM4P67936 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 AC244394.1-201ENST00000435000 1665 ntBASIC15.66■□□□□ 0.1
TPM4P67936 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TPM4P67936 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM4P67936 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM4P67936 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM4P67936 RPL13AP3-202ENST00000494676 1473 ntBASIC15.65■□□□□ 0.1
TPM4P67936 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM4P67936 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM4P67936 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM4P67936 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 AP001972.5-201ENST00000624624 2338 ntBASIC15.65■□□□□ 0.1
TPM4P67936 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM4P67936 FAM58BP-201ENST00000439056 645 ntBASIC15.65■□□□□ 0.1
TPM4P67936 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM4P67936 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM4P67936 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 PGAM1P5-201ENST00000548011 764 ntBASIC15.65■□□□□ 0.1
TPM4P67936 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM4P67936 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM4P67936 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 AC107375.1-201ENST00000564464 2231 ntBASIC15.65■□□□□ 0.1
TPM4P67936 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM4P67936 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TPM4P67936 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TPM4P67936 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TPM4P67936 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM4P67936 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM4P67936 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM4P67936 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TPM4P67936 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
TPM4P67936 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
TPM4P67936 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC15.64■□□□□ 0.09
TPM4P67936 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.64■□□□□ 0.09
TPM4P67936 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TPM4P67936 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC15.64■□□□□ 0.09
TPM4P67936 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 VENTXP1-201ENST00000569334 2716 ntBASIC15.64■□□□□ 0.09
TPM4P67936 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM4P67936 MIR1202-201ENST00000408529 83 ntBASIC15.64■□□□□ 0.09
TPM4P67936 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM4P67936 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TPM4P67936 AC007389.4-201ENST00000454674 793 ntBASIC15.64■□□□□ 0.09
TPM4P67936 FTH1P14-201ENST00000482930 551 ntBASIC15.64■□□□□ 0.09
TPM4P67936 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.64■□□□□ 0.09
TPM4P67936 SLC25A47P1-201ENST00000531577 414 ntBASIC15.64■□□□□ 0.09
TPM4P67936 AC190387.1-201ENST00000551683 408 ntBASIC15.64■□□□□ 0.09
TPM4P67936 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.64■□□□□ 0.09
TPM4P67936 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 AC133540.1-201ENST00000620845 1019 ntBASIC15.64■□□□□ 0.09
TPM4P67936 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.64■□□□□ 0.09
TPM4P67936 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TPM4P67936 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TPM4P67936 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms