Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VBP1P61758 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 NBPF17P-201ENST00000401087 2119 ntBASIC12.47□□□□□ -0.41
VBP1P61758 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.47□□□□□ -0.41
VBP1P61758 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 LAP3P2-201ENST00000454686 1454 ntBASIC12.47□□□□□ -0.41
VBP1P61758 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VBP1P61758 AC104590.1-202ENST00000558368 1921 ntBASIC12.47□□□□□ -0.41
VBP1P61758 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VBP1P61758 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VBP1P61758 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.47□□□□□ -0.41
VBP1P61758 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 TUBB2BP1-201ENST00000404155 871 ntBASIC12.47□□□□□ -0.41
VBP1P61758 RN7SKP175-201ENST00000408472 289 ntBASIC12.47□□□□□ -0.41
VBP1P61758 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.47□□□□□ -0.41
VBP1P61758 POM121L8P-201ENST00000417732 1281 ntBASIC12.47□□□□□ -0.41
VBP1P61758 AL590627.1-203ENST00000421194 1026 ntBASIC12.47□□□□□ -0.41
VBP1P61758 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.47□□□□□ -0.41
VBP1P61758 AC245100.3-201ENST00000441281 285 ntBASIC12.47□□□□□ -0.41
VBP1P61758 POM121L9P-203ENST00000441984 1285 ntBASIC12.47□□□□□ -0.41
VBP1P61758 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.47□□□□□ -0.41
VBP1P61758 FTLP10-202ENST00000505798 471 ntBASIC12.47□□□□□ -0.41
VBP1P61758 AC027369.6-201ENST00000525520 931 ntBASIC12.47□□□□□ -0.41
VBP1P61758 AL512356.2-201ENST00000546955 174 ntBASIC12.47□□□□□ -0.41
VBP1P61758 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.47□□□□□ -0.41
VBP1P61758 MTDHP5-201ENST00000598980 586 ntBASIC12.47□□□□□ -0.41
VBP1P61758 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
VBP1P61758 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.47□□□□□ -0.41
VBP1P61758 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
VBP1P61758 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 CCT8L1P-201ENST00000465400 1674 ntBASIC12.47□□□□□ -0.41
VBP1P61758 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VBP1P61758 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.47□□□□□ -0.41
VBP1P61758 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VBP1P61758 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
VBP1P61758 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.46□□□□□ -0.41
VBP1P61758 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
VBP1P61758 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
VBP1P61758 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC12.46□□□□□ -0.41
VBP1P61758 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.46□□□□□ -0.41
VBP1P61758 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.46□□□□□ -0.41
VBP1P61758 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.46□□□□□ -0.41
VBP1P61758 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.46□□□□□ -0.41
VBP1P61758 DGKZP1-201ENST00000378718 2776 ntBASIC12.46□□□□□ -0.41
VBP1P61758 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
VBP1P61758 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
VBP1P61758 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.46□□□□□ -0.41
VBP1P61758 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.46□□□□□ -0.41
VBP1P61758 AC093433.1-201ENST00000458048 571 ntBASIC12.46□□□□□ -0.41
VBP1P61758 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
VBP1P61758 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VBP1P61758 AP000344.2-201ENST00000512987 629 ntBASIC12.46□□□□□ -0.41
VBP1P61758 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms