Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.16□□□□□ -0.46
DEFA3P59666 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.16□□□□□ -0.46
DEFA3P59666 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
DEFA3P59666 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.16□□□□□ -0.46
DEFA3P59666 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
DEFA3P59666 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.16□□□□□ -0.46
DEFA3P59666 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.16□□□□□ -0.46
DEFA3P59666 AC007967.4-201ENST00000614700 386 ntBASIC12.16□□□□□ -0.46
DEFA3P59666 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.16□□□□□ -0.46
DEFA3P59666 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.16□□□□□ -0.46
DEFA3P59666 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
DEFA3P59666 AC009533.1-201ENST00000539757 3158 ntBASIC12.16□□□□□ -0.46
DEFA3P59666 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.16□□□□□ -0.46
DEFA3P59666 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
DEFA3P59666 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
DEFA3P59666 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
DEFA3P59666 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
DEFA3P59666 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
DEFA3P59666 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
DEFA3P59666 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
DEFA3P59666 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
DEFA3P59666 AC008158.1-201ENST00000578759 3668 ntBASIC12.16□□□□□ -0.46
DEFA3P59666 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
DEFA3P59666 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
DEFA3P59666 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC12.16□□□□□ -0.46
DEFA3P59666 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
DEFA3P59666 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
DEFA3P59666 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.15□□□□□ -0.46
DEFA3P59666 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.15□□□□□ -0.46
DEFA3P59666 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.15□□□□□ -0.46
DEFA3P59666 AC040169.1-201ENST00000565382 521 ntBASIC12.15□□□□□ -0.46
DEFA3P59666 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 RN7SL850P-201ENST00000579959 291 ntBASIC12.15□□□□□ -0.46
DEFA3P59666 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.15□□□□□ -0.46
DEFA3P59666 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
DEFA3P59666 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.15□□□□□ -0.46
DEFA3P59666 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC12.15□□□□□ -0.46
DEFA3P59666 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
DEFA3P59666 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
DEFA3P59666 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
DEFA3P59666 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
DEFA3P59666 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA3P59666 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA3P59666 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
DEFA3P59666 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.14□□□□□ -0.47
DEFA3P59666 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DEFA3P59666 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms