Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLRN1P58418 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.46□□□□□ -0.41
CLRN1P58418 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 CR383656.2-201ENST00000548656 2254 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.46□□□□□ -0.41
CLRN1P58418 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.46□□□□□ -0.41
CLRN1P58418 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.46□□□□□ -0.41
CLRN1P58418 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.46□□□□□ -0.41
CLRN1P58418 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.46□□□□□ -0.41
CLRN1P58418 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.46□□□□□ -0.41
CLRN1P58418 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CLRN1P58418 MIR769-201ENST00000390225 118 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 MIR1247-201ENST00000408206 136 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 SNORA50C-201ENST00000408535 133 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.46□□□□□ -0.41
CLRN1P58418 FNTAP2-201ENST00000430308 634 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.46□□□□□ -0.41
CLRN1P58418 AC244107.1-201ENST00000442033 332 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 AL596276.2-201ENST00000447525 331 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 RN7SL11P-201ENST00000471305 293 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.46□□□□□ -0.41
CLRN1P58418 AC116345.2-201ENST00000512837 523 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CLRN1P58418 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.46□□□□□ -0.41
CLRN1P58418 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.46□□□□□ -0.41
CLRN1P58418 AC079336.7-201ENST00000623428 1078 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 SNORA50.1-201ENST00000628590 135 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 AL359845.1-201ENST00000458202 1648 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 AC020917.4-201ENST00000623994 1999 ntBASIC12.46□□□□□ -0.41
CLRN1P58418 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLRN1P58418 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLRN1P58418 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CLRN1P58418 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CLRN1P58418 AL591122.2-201ENST00000624125 1853 ntBASIC12.46□□□□□ -0.42
CLRN1P58418 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CLRN1P58418 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLRN1P58418 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLRN1P58418 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLRN1P58418 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CLRN1P58418 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.46□□□□□ -0.42
CLRN1P58418 AL445209.1-201ENST00000607269 3491 ntBASIC12.46□□□□□ -0.42
CLRN1P58418 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLRN1P58418 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.45□□□□□ -0.42
CLRN1P58418 MARK2P16-201ENST00000605714 1723 ntBASIC12.45□□□□□ -0.42
CLRN1P58418 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CLRN1P58418 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 AC079781.5-202ENST00000641784 3743 ntBASIC12.45□□□□□ -0.42
CLRN1P58418 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
CLRN1P58418 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLRN1P58418 KRT18P9-201ENST00000604826 1300 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms