Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 COLQ-201ENST00000383781 2784 ntTSL 5 BASIC11.73□□□□□ -0.53
NKX2-5P52952 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
NKX2-5P52952 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 TATDN2P2-201ENST00000403590 2226 ntBASIC11.73□□□□□ -0.53
NKX2-5P52952 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
NKX2-5P52952 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.73□□□□□ -0.53
NKX2-5P52952 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.73□□□□□ -0.53
NKX2-5P52952 C2-211ENST00000469372 1906 ntTSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.73□□□□□ -0.53
NKX2-5P52952 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC11.73□□□□□ -0.53
NKX2-5P52952 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.73□□□□□ -0.53
NKX2-5P52952 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 AL512791.2-201ENST00000615251 4609 ntBASIC11.73□□□□□ -0.53
NKX2-5P52952 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.73□□□□□ -0.53
NKX2-5P52952 AC092117.2-201ENST00000623937 1659 ntBASIC11.73□□□□□ -0.53
NKX2-5P52952 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC11.73□□□□□ -0.53
NKX2-5P52952 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
NKX2-5P52952 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 PELI1-201ENST00000358912 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
NKX2-5P52952 AFG3L1P-214ENST00000454997 3327 ntTSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 PTOV1-AS1-202ENST00000600742 3181 ntTSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NKX2-5P52952 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC11.73□□□□□ -0.53
NKX2-5P52952 AC084855.2-201ENST00000559400 2393 ntTSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
NKX2-5P52952 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NKX2-5P52952 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 Z97205.2-201ENST00000564697 1639 ntBASIC11.72□□□□□ -0.53
NKX2-5P52952 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NKX2-5P52952 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NKX2-5P52952 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.72□□□□□ -0.53
NKX2-5P52952 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.72□□□□□ -0.53
NKX2-5P52952 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.72□□□□□ -0.53
NKX2-5P52952 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.72□□□□□ -0.53
NKX2-5P52952 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.72□□□□□ -0.53
NKX2-5P52952 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.72□□□□□ -0.53
NKX2-5P52952 AC027237.1-201ENST00000560942 655 ntBASIC11.72□□□□□ -0.53
NKX2-5P52952 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 CLEC4GP1-201ENST00000596555 870 ntBASIC11.72□□□□□ -0.53
NKX2-5P52952 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
NKX2-5P52952 NPAP1P7-201ENST00000613027 823 ntBASIC11.72□□□□□ -0.53
NKX2-5P52952 AP000550.4-202ENST00000639755 178 ntBASIC11.72□□□□□ -0.53
NKX2-5P52952 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 AC012313.5-201ENST00000594816 2517 ntBASIC11.72□□□□□ -0.53
NKX2-5P52952 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NKX2-5P52952 LILRB3-202ENST00000346401 2204 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
NKX2-5P52952 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 NHSL2-202ENST00000510661 3082 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
NKX2-5P52952 PTCD2-211ENST00000536805 1911 ntTSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 AL359317.2-201ENST00000554898 1826 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms