Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD40P25942 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CD40P25942 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.96□□□□□ -0.5
CD40P25942 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.96□□□□□ -0.5
CD40P25942 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC11.96□□□□□ -0.5
CD40P25942 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD40P25942 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CD40P25942 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 AF013593.1-201ENST00000458074 1487 ntBASIC11.95□□□□□ -0.5
CD40P25942 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 AL365181.1-201ENST00000564032 1828 ntBASIC11.95□□□□□ -0.5
CD40P25942 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 AC106827.1-201ENST00000366454 431 ntBASIC11.95□□□□□ -0.5
CD40P25942 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CD40P25942 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CD40P25942 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 AC108734.2-201ENST00000420887 1069 ntBASIC11.95□□□□□ -0.5
CD40P25942 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC11.95□□□□□ -0.5
CD40P25942 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC11.95□□□□□ -0.5
CD40P25942 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CD40P25942 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC11.95□□□□□ -0.5
CD40P25942 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC11.95□□□□□ -0.5
CD40P25942 RN7SL556P-201ENST00000582856 298 ntBASIC11.95□□□□□ -0.5
CD40P25942 AC010976.2-201ENST00000609697 852 ntBASIC11.95□□□□□ -0.5
CD40P25942 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CD40P25942 AC011471.3-201ENST00000623576 402 ntBASIC11.95□□□□□ -0.5
CD40P25942 AC079416.2-201ENST00000625035 1193 ntBASIC11.95□□□□□ -0.5
CD40P25942 AL451007.2-201ENST00000632004 563 ntBASIC11.95□□□□□ -0.5
CD40P25942 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC11.95□□□□□ -0.5
CD40P25942 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CD40P25942 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CD40P25942 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CD40P25942 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.95□□□□□ -0.5
CD40P25942 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CD40P25942 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CD40P25942 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 AP000354.1-201ENST00000396982 456 ntBASIC11.94□□□□□ -0.5
CD40P25942 AC097065.1-201ENST00000425737 517 ntBASIC11.94□□□□□ -0.5
CD40P25942 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC11.94□□□□□ -0.5
CD40P25942 AC093826.1-201ENST00000508655 993 ntBASIC11.94□□□□□ -0.5
CD40P25942 RPS23-207ENST00000511844 530 ntTSL 2 BASIC11.94□□□□□ -0.5
CD40P25942 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC11.94□□□□□ -0.5
CD40P25942 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD40P25942 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC11.94□□□□□ -0.5
CD40P25942 AC013553.1-201ENST00000560906 267 ntBASIC11.94□□□□□ -0.5
CD40P25942 CES1P2-201ENST00000566467 1242 ntBASIC11.94□□□□□ -0.5
CD40P25942 MIR3940-201ENST00000579148 102 ntBASIC11.94□□□□□ -0.5
CD40P25942 TRMT112P3-201ENST00000580149 358 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms