Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.09□□□□□ -0.47
EPHA1P21709 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC12.09□□□□□ -0.47
EPHA1P21709 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
EPHA1P21709 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
EPHA1P21709 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.08□□□□□ -0.47
EPHA1P21709 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
EPHA1P21709 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.47
EPHA1P21709 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 AC073548.1-201ENST00000624088 1882 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 AL591122.2-201ENST00000624125 1853 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
EPHA1P21709 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
EPHA1P21709 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
EPHA1P21709 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 RN7SKP214-201ENST00000364208 315 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
EPHA1P21709 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 RPL18P13-201ENST00000478088 569 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 RCC2P8-201ENST00000502779 1035 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
EPHA1P21709 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.08□□□□□ -0.48
EPHA1P21709 AC008805.1-201ENST00000590892 364 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.08□□□□□ -0.48
EPHA1P21709 AL137246.1-201ENST00000607072 977 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 MIR7845-201ENST00000618396 99 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.08□□□□□ -0.48
EPHA1P21709 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 AC215219.1-201ENST00000400706 1817 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
EPHA1P21709 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
EPHA1P21709 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.08□□□□□ -0.48
EPHA1P21709 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.08□□□□□ -0.48
EPHA1P21709 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.08□□□□□ -0.48
EPHA1P21709 MRPL37P1-201ENST00000592451 1337 ntBASIC12.08□□□□□ -0.48
EPHA1P21709 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.08□□□□□ -0.48
EPHA1P21709 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
EPHA1P21709 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
EPHA1P21709 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
EPHA1P21709 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.07□□□□□ -0.48
EPHA1P21709 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.07□□□□□ -0.48
EPHA1P21709 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
EPHA1P21709 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.07□□□□□ -0.48
EPHA1P21709 AC009093.2-202ENST00000620513 2079 ntBASIC12.07□□□□□ -0.48
EPHA1P21709 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.07□□□□□ -0.48
EPHA1P21709 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.07□□□□□ -0.48
EPHA1P21709 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
EPHA1P21709 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 AC004241.5-201ENST00000623870 2448 ntBASIC12.07□□□□□ -0.48
EPHA1P21709 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
EPHA1P21709 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms