Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 PPP1R26P2-201ENST00000611403 3595 ntBASIC10.76□□□□□ -0.69
TRBV12-3P01733 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC10.76□□□□□ -0.69
TRBV12-3P01733 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TRBV12-3P01733 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AL445209.1-201ENST00000607269 3491 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC025183.3-201ENST00000623526 1482 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC073548.1-201ENST00000624088 1882 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AL512306.1-201ENST00000432698 848 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 ERP29P1-201ENST00000442902 706 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 ORAOV1P1-201ENST00000503108 395 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 FOS-204ENST00000554617 796 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC138894.2-201ENST00000602838 371 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC005632.3-201ENST00000605544 308 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC106872.11-201ENST00000605838 421 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC103810.10-201ENST00000606504 343 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC084781.1-201ENST00000613737 656 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 PES1P2-201ENST00000449745 1735 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC004623.1-201ENST00000624592 2127 ntBASIC10.75□□□□□ -0.69
TRBV12-3P01733 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TRBV12-3P01733 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
TRBV12-3P01733 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 NRADDP-202ENST00000641269 1585 ntBASIC10.74□□□□□ -0.69
TRBV12-3P01733 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.74□□□□□ -0.69
TRBV12-3P01733 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRBV12-3P01733 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
TRBV12-3P01733 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms