Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.98□□□□□ -0.17
RFPL1O75677 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
RFPL1O75677 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RFPL1O75677 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RFPL1O75677 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.98□□□□□ -0.17
RFPL1O75677 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.98□□□□□ -0.17
RFPL1O75677 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
RFPL1O75677 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.98□□□□□ -0.17
RFPL1O75677 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.98□□□□□ -0.17
RFPL1O75677 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.98□□□□□ -0.17
RFPL1O75677 RPS2P36-201ENST00000456516 831 ntBASIC13.98□□□□□ -0.17
RFPL1O75677 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.98□□□□□ -0.17
RFPL1O75677 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.98□□□□□ -0.17
RFPL1O75677 AL645939.5-201ENST00000606834 243 ntBASIC13.98□□□□□ -0.17
RFPL1O75677 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
RFPL1O75677 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
RFPL1O75677 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RFPL1O75677 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.98□□□□□ -0.17
RFPL1O75677 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.98□□□□□ -0.17
RFPL1O75677 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.98□□□□□ -0.17
RFPL1O75677 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.98□□□□□ -0.17
RFPL1O75677 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RFPL1O75677 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.98□□□□□ -0.17
RFPL1O75677 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.98□□□□□ -0.17
RFPL1O75677 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RFPL1O75677 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RFPL1O75677 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RFPL1O75677 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.98□□□□□ -0.17
RFPL1O75677 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RFPL1O75677 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
RFPL1O75677 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
RFPL1O75677 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
RFPL1O75677 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.97□□□□□ -0.17
RFPL1O75677 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RFPL1O75677 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.97□□□□□ -0.17
RFPL1O75677 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.97□□□□□ -0.17
RFPL1O75677 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RFPL1O75677 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RFPL1O75677 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.97□□□□□ -0.17
RFPL1O75677 AC007274.2-201ENST00000421675 662 ntBASIC13.97□□□□□ -0.17
RFPL1O75677 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.97□□□□□ -0.17
RFPL1O75677 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 VDAC1P1-201ENST00000439229 848 ntBASIC13.97□□□□□ -0.17
RFPL1O75677 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.97□□□□□ -0.17
RFPL1O75677 TUBB8P8-201ENST00000458717 1058 ntBASIC13.97□□□□□ -0.17
RFPL1O75677 AC134698.3-201ENST00000523880 214 ntBASIC13.97□□□□□ -0.17
RFPL1O75677 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.97□□□□□ -0.17
RFPL1O75677 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.97□□□□□ -0.17
RFPL1O75677 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.97□□□□□ -0.17
RFPL1O75677 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.97□□□□□ -0.17
RFPL1O75677 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.97□□□□□ -0.17
RFPL1O75677 MIR3907-201ENST00000579424 151 ntBASIC13.97□□□□□ -0.17
RFPL1O75677 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 AC026740.1-201ENST00000607068 791 ntBASIC13.97□□□□□ -0.17
RFPL1O75677 AC128714.1-201ENST00000637035 887 ntBASIC13.97□□□□□ -0.17
RFPL1O75677 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RFPL1O75677 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.97□□□□□ -0.17
RFPL1O75677 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RFPL1O75677 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms