Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.19□□□□□ -0.62
UPK2O00526 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK2O00526 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
UPK2O00526 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK2O00526 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
UPK2O00526 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.18□□□□□ -0.62
UPK2O00526 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 AC067931.2-201ENST00000623655 2003 ntBASIC11.18□□□□□ -0.62
UPK2O00526 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
UPK2O00526 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
UPK2O00526 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.18□□□□□ -0.62
UPK2O00526 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 BNIP3P42-201ENST00000454982 569 ntBASIC11.18□□□□□ -0.62
UPK2O00526 DUX4L50-201ENST00000455245 715 ntBASIC11.18□□□□□ -0.62
UPK2O00526 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.18□□□□□ -0.62
UPK2O00526 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC11.18□□□□□ -0.62
UPK2O00526 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.18□□□□□ -0.62
UPK2O00526 RCC2P8-201ENST00000502779 1035 ntBASIC11.18□□□□□ -0.62
UPK2O00526 MARK2P5-201ENST00000507649 634 ntBASIC11.18□□□□□ -0.62
UPK2O00526 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.18□□□□□ -0.62
UPK2O00526 KRT8P1-201ENST00000557533 1207 ntBASIC11.18□□□□□ -0.62
UPK2O00526 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 BNIP3P29-201ENST00000598302 571 ntBASIC11.18□□□□□ -0.62
UPK2O00526 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 AC011447.5-201ENST00000616168 564 ntBASIC11.18□□□□□ -0.62
UPK2O00526 Z82170.1-201ENST00000625081 3192 ntBASIC11.18□□□□□ -0.62
UPK2O00526 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
UPK2O00526 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.18□□□□□ -0.62
UPK2O00526 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK2O00526 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.18□□□□□ -0.62
UPK2O00526 AC008040.5-201ENST00000599781 1781 ntBASIC11.18□□□□□ -0.62
UPK2O00526 KRT8P21-201ENST00000430398 1491 ntBASIC11.18□□□□□ -0.62
UPK2O00526 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK2O00526 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
UPK2O00526 TNRC18P1-201ENST00000502875 3650 ntBASIC11.17□□□□□ -0.62
UPK2O00526 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
UPK2O00526 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC11.17□□□□□ -0.62
UPK2O00526 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 AC104758.3-203ENST00000562938 2123 ntBASIC11.17□□□□□ -0.62
UPK2O00526 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UPK2O00526 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms