Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 CCT8L1P-201ENST00000465400 1674 ntBASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 BASP1P1-201ENST00000430708 665 ntBASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 DFFBP1-201ENST00000433250 979 ntBASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AC140658.4-201ENST00000561990 352 ntBASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AC132938.4-201ENST00000623835 848 ntBASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AC104758.3-203ENST00000562938 2123 ntBASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 AC022497.1-201ENST00000624916 3691 ntBASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP3Q9Y2W7 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AC022364.1-202ENST00000617468 2409 ntBASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 CSPG4P13-202ENST00000567704 4801 ntBASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AC027020.2-201ENST00000602585 2389 ntBASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AC015818.9-201ENST00000591705 4582 ntBASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP3Q9Y2W7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms