Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RCL1Q9Y2P8 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 SHMT1P1-201ENST00000419974 1312 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 AL845472.1-202ENST00000624675 4080 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 TPM3P8-201ENST00000330554 643 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 CD8B2-202ENST00000417670 633 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 AC009486.1-201ENST00000569860 813 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 OR10B1P-201ENST00000601666 907 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 RPSAP52-203ENST00000622976 1023 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 CU634019.7-201ENST00000624153 1185 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 FP236241.2-201ENST00000624906 1185 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 SHC1P1-201ENST00000425230 1745 ntBASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RCL1Q9Y2P8 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 AL008718.2-201ENST00000609206 1313 ntBASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms