Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MEG3_2.1-201ENST00000611456 105 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 TEKT4P2-202ENST00000559466 1312 ntBASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.55□□□□□ -0.4
PARPBPQ9NWS1 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 AL157996.1-201ENST00000624684 2299 ntBASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 UPF3AP2-201ENST00000457924 1132 ntBASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 RN7SL67P-201ENST00000492147 296 ntBASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 SLC25A15P3-201ENST00000505530 290 ntBASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 RN7SL574P-201ENST00000581512 297 ntBASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 AC007326.1-201ENST00000604539 458 ntBASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.54□□□□□ -0.4
PARPBPQ9NWS1 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PARPBPQ9NWS1 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms