Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 AL512384.1-201ENST00000406683 331 ntBASIC10.64□□□□□ -0.71
VGLL1Q99990 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC10.64□□□□□ -0.71
VGLL1Q99990 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC10.64□□□□□ -0.71
VGLL1Q99990 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC10.64□□□□□ -0.71
VGLL1Q99990 MAX-218ENST00000557746 571 ntTSL 4 BASIC10.64□□□□□ -0.71
VGLL1Q99990 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 NAA38-206ENST00000576384 424 ntTSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 MIR4783-201ENST00000580343 82 ntBASIC10.64□□□□□ -0.71
VGLL1Q99990 MIR3197-201ENST00000582241 73 ntBASIC10.64□□□□□ -0.71
VGLL1Q99990 AC005962.1-201ENST00000584100 773 ntBASIC10.64□□□□□ -0.71
VGLL1Q99990 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC10.64□□□□□ -0.71
VGLL1Q99990 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 AC009884.2-201ENST00000603110 324 ntBASIC10.64□□□□□ -0.71
VGLL1Q99990 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC10.64□□□□□ -0.71
VGLL1Q99990 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.64□□□□□ -0.71
VGLL1Q99990 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
VGLL1Q99990 VENTXP1-201ENST00000569334 2716 ntBASIC10.64□□□□□ -0.71
VGLL1Q99990 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
VGLL1Q99990 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 AC092123.2-201ENST00000611189 5421 ntBASIC10.63□□□□□ -0.71
VGLL1Q99990 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC10.63□□□□□ -0.71
VGLL1Q99990 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 AC144522.1-201ENST00000625111 1658 ntBASIC10.63□□□□□ -0.71
VGLL1Q99990 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC10.63□□□□□ -0.71
VGLL1Q99990 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.63□□□□□ -0.71
VGLL1Q99990 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
VGLL1Q99990 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 AC115284.2-201ENST00000624646 2054 ntBASIC10.63□□□□□ -0.71
VGLL1Q99990 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC10.63□□□□□ -0.71
VGLL1Q99990 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC10.63□□□□□ -0.71
VGLL1Q99990 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC10.63□□□□□ -0.71
VGLL1Q99990 AC003686.1-201ENST00000550956 1034 ntBASIC10.63□□□□□ -0.71
VGLL1Q99990 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC10.63□□□□□ -0.71
VGLL1Q99990 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC10.63□□□□□ -0.71
VGLL1Q99990 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC10.63□□□□□ -0.71
VGLL1Q99990 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 RHOXF1P1-202ENST00000635473 501 ntBASIC10.63□□□□□ -0.71
VGLL1Q99990 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 CU639417.3-201ENST00000624240 1404 ntBASIC10.63□□□□□ -0.71
VGLL1Q99990 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 POM121L14P-201ENST00000406100 1558 ntBASIC10.63□□□□□ -0.71
VGLL1Q99990 CYP4F23P-201ENST00000593402 1579 ntBASIC10.63□□□□□ -0.71
VGLL1Q99990 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
VGLL1Q99990 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
VGLL1Q99990 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms