Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF135Q8IUD6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 RN7SL767P-201ENST00000493013 295 ntBASIC14.8□□□□□ -0.04
RNF135Q8IUD6 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 KNOP1P1-201ENST00000542108 989 ntBASIC14.8□□□□□ -0.04
RNF135Q8IUD6 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 AKR1B10P2-201ENST00000577332 927 ntBASIC14.8□□□□□ -0.04
RNF135Q8IUD6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF135Q8IUD6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 AC106827.1-201ENST00000366454 431 ntBASIC14.79□□□□□ -0.04
RNF135Q8IUD6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 AC092570.1-201ENST00000414446 469 ntBASIC14.79□□□□□ -0.04
RNF135Q8IUD6 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 AC095040.1-201ENST00000513286 675 ntBASIC14.79□□□□□ -0.04
RNF135Q8IUD6 IGHV1-12-201ENST00000518307 205 ntBASIC14.79□□□□□ -0.04
RNF135Q8IUD6 IGHEP2-201ENST00000519308 1256 ntBASIC14.79□□□□□ -0.04
RNF135Q8IUD6 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 AC110057.1-201ENST00000636031 898 ntBASIC14.79□□□□□ -0.04
RNF135Q8IUD6 DMBT1P1-203ENST00000636837 4628 ntBASIC14.79□□□□□ -0.04
RNF135Q8IUD6 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RNF135Q8IUD6 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF135Q8IUD6 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF135Q8IUD6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF135Q8IUD6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF135Q8IUD6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF135Q8IUD6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF135Q8IUD6 AL591122.2-201ENST00000624125 1853 ntBASIC14.78□□□□□ -0.04
RNF135Q8IUD6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF135Q8IUD6 BRD7P5-201ENST00000299197 1822 ntBASIC14.78□□□□□ -0.04
RNF135Q8IUD6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF135Q8IUD6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms